Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELV-PMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPG---NRQVEHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEM-PMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAG-AGFPEILELSGPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2JL1 Chain:A ((1-285)) | FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIGS-LTPLKETVKQAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144140 for 2364 contacts (-61.0/contact) +
2D Compatibility (PS) -30475 + (NN) -16959 + (LL) 132
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -210642.0 ( -89.10 by residue)
QMean score : 0.632
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