Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MAHENLRELEDQLIELR-QTYQEVISETREFED--PQLQNGPINAAEVRLSALRHEIAEVEKKIKKAESKTE--
1GRJ Chain:? ((2-85))
QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTK
General information:
TITO was launched using:
RESULT:
Template:
1GRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6166 for 389 contacts (15.9/contact) +
2D Compatibility (PS) -7662 + (NN) -5070 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -8866.0 ( -22.79 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1GRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GRJ-query.scw
PDB file :
Tito_Scwrl_1GRJ.pdb
: