Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYALEIKGLRKIYSTGVE---ALRGVDLTVEEGDFYALLGPNGAGKSTTIGIITSLVNKTSGQV---SVFGYDLDTDIVRA--KQQIGLVPQEFNFNP----FETVQQIVVNQAGYYG-VSRKEAIKRSEKYLKQSNLWEK-RSERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRREMWTFLRELN-ESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENTSMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLSEHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV |
| 1L2T Chain:A ((2-209)) | ----IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFK--YRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84460 for 1436 contacts (-58.8/contact) +
2D Compatibility (PS) -20716 + (NN) -5481 + (LL) 9568
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -117889.0 ( -82.10 by residue)
QMean score : 0.520
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