Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIEIYTVNGESIRLDDDA--KINNISIHELSKADLKNLFNEKCIELTKY----DLTYFINTNQVNWFLVSEGIH
2JV8 Chain:A ((1-73))
MTHHTEVFEGGTIDIEDDTSLTINGKEISYVHDA-VKNKWSSRYLPYTQYDSLLDLARAIIRDTVEFSGVKEGS-
General information:
TITO was launched using:
RESULT:
Template:
2JV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7269 for 379 contacts (-19.2/contact) +
2D Compatibility (PS) -6763 + (NN) 1353 + (LL) -32
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -16511.0 ( -43.56 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_2JV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JV8-query.scw
PDB file :
Tito_Scwrl_2JV8.pdb
: