Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLSLNDLRIFPKTP--SQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVVPAEFKAPASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSLSSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDLDQIQALPLFSQQLVVTLNQLGVFKENYKQM- |
3CRA Chain:A ((2-260)) | ---NQIDRLLTIMQRLRDPEN--------------GCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGF-------DWTTLGPVVDKVYEEIDEVMYEARQAVV----------------------------DQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMT------------------ETMEEVWQQVKRQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 55338 for 1355 contacts (40.8/contact) +
2D Compatibility (PS) -25038 + (NN) -9602 + (LL) 5396
1D Compatibility (HY) 400 + (ID) 1200
Total energy: 25294.0 ( 18.67 by residue)
QMean score : 0.274
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