Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVKASETL-----VQTLKNWGIDHVYGLPGDSIDTVVDALRKEQEAIEFIHVRHEEVATLAAAAYTKLTGKIGVALSIGGPGAIHLLNGMYDAKMDHVPMLVLAGQVTTDVLNTGFFQEVNLPAIFEDVAVYNKQIDNAETLADVVDEAIRTAYKEKGVAVLTIPNDIPSQVIKASLEAKPVKFEQENPKLDEAAIQEAVTLIEK---AEKPVILAGLGTKHAGPELIAFSEKLKIPIIHSLPAKTIVPDDHPNALGNLGKIGTKPAYEAMQETDLLLMFGNDYPYSDYLPKKTDCIQIDIDPAKISKRFPAIVGLVGDAAEIISDLTAKIAPVEERKFLQACQENMQEWWKWLEEDIAQTSDPIAPEVVMANIQKIADKDAVFSIDVGTATVWSTRYLHLTPENDFIVSAWLGTMGCGLPGAIAAKKAFPDRQAIAIVGDGGFSMVMQDFVTAVGLNMPMIVVVLNNQQLSFIKYEQQSAGELNY-AIDLPDINYAKFAESCGGIGFRVEKMADLEAAFENAKLATK--PVIIDVSVDSAAAPLPG-KIVMDEALGYTKFEIQSVLEDHRFAKMPPLKTILRRFL
1Y9D Chain:D ((9-589))------TNILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTG-------EMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQGVAVVQIPVDLPWQQIPAE-DWYASA--------PEPDVQAVTRLTQTLLAAERPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRAAQKPANEALAQADVVLFVGNNY-------NTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSERESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLID-AVITGDRPLPAEKLRLDSAMS-SAADIEAFKQRYEAQDLQPLSTYLKQF-


General information:
TITO was launched using:
RESULT:

Template: 1Y9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -352023 for 4969 contacts (-70.8/contact) +
2D Compatibility (PS) -58660 + (NN) -26329 + (LL) 2188
1D Compatibility (HY) -43200 + (ID) 11400
Total energy: -489424.0 ( -98.50 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_1Y9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y9D-query.scw
PDB file : Tito_Scwrl_1Y9D.pdb: