Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTIS----KWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
4JQD Chain:A ((1-64))
MLIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYL-------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JQD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30636 for 393 contacts (-78.0/contact) +
2D Compatibility (PS) -6220 + (NN) -982 + (LL) 10308
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -30930.0 ( -78.70 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_4JQD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JQD-query.scw
PDB file :
Tito_Scwrl_4JQD.pdb
: