Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDY-FDEEINIPLNRVAKIRG--VRTKILGKELLSNILEIDMISGVKYQFVV---NKQKKWLEAVSEVLESRGESEKLG
1U5E Chain:A ((141-221))
------------------------WCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKD----GKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDL-------
General information:
TITO was launched using:
RESULT:
Template:
1U5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37704 for 441 contacts (-85.5/contact) +
2D Compatibility (PS) -8161 + (NN) -2103 + (LL) 1896
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -49422.0 ( -112.07 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1U5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U5E-query.scw
PDB file :
Tito_Scwrl_1U5E.pdb
: