Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3KP7 Chain:A ((8-147))
---------HISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL-----------KIIKLSNKGKKYIKERKAI--MSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSY-
General information:
TITO was launched using:
RESULT:
Template:
3KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54936 for 781 contacts (-70.3/contact) +
2D Compatibility (PS) -13750 + (NN) -3155 + (LL) 1100
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -78391.0 ( -100.37 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP7-query.scw
PDB file :
Tito_Scwrl_3KP7.pdb
: