Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLS--LPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
3KKS Chain:A ((2-145)) | --------------------------------------------------------------------------------------------------------------------------SHLWQMDNTHW----NKTIIWVAVETNSGLVEAQVIPE-ETALQVALCILQLIQRYTV-LHLHSDNGPCFTAHRIENLCKYLGITKTTGIPYNPQSQGVVERAHRDLKDRLAAYQG----DCETVEAALSLALVSLNK-KRGG-IGGHTPYEIYLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40287 for 1061 contacts (-38.0/contact) +
2D Compatibility (PS) -14868 + (NN) -4315 + (LL) 10812
1D Compatibility (HY) 800 + (ID) 1300
Total energy: -49158.0 ( -46.33 by residue)
QMean score : 0.334
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