Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------VSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNF----TVKVEYVDADGAEIAPSDILTDYHYVSTP---KDIPGYKLREIPH-NATGNITDTGIIVRYIYDKTIDVRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFGKPNQVTVNYLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIAPK-----------ALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAI-SCGVYLLVQQSQKRRRKE
4XNV Chain:A ((38-382))SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSL-----------GRLKKKNAICISVLVWLIVVVAISP----ILFYSGTGVR------KNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR


General information:
TITO was launched using:
RESULT:

Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1653 for 2195 contacts (-0.8/contact) +
2D Compatibility (PS) -31267 + (NN) -2284 + (LL) 464
1D Compatibility (HY) -14000 + (ID) 2400
Total energy: -51140.0 ( -23.30 by residue)
QMean score : 0.083

(partial model without unconserved sides chains):
PDB file : Tito_4XNV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XNV-query.scw
PDB file : Tito_Scwrl_4XNV.pdb: