Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKGKTNDEISEEQHKGVSLADIKASIEDKINYYPKRHGIDFYHTYPEDLELLAEMGFKTFRTSLDWTRIFPTGE-ETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIV--LNHGGWHNRKVIDLFEKYGKTVLDRYNKKVKYWIVINQINLIQFEPF----------NSTAIPYDAVDDYLSATYQAVHNQFVASAKIYEYGKALNPDL--MIGTMLADCTAYPFSCDPDDIVLAMKRNRME--YFFADVQFQGEYPQYALNYFEENNIHIEITEEDKAILQKNTMDYLALSYYYSQMVDSKRNDLDPASITPNPHLKANP----------WGWAVDPKGLYNALSQYWDRYHK-PIIIAENGFGMYDK-LENGEIHDDYRIDYLSAHLKEMKRAMYGGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVDLDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA |
| 1QOX Chain:A ((2-450)) | SIHM---FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAH-TP----GKVKNGDNGNV-------------------ACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQGTG--EVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ---GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGNK------------DLQLAIDVSHHLLVAHGRAVTLFRELGI--SGEIGIAPNTSWAVPYR-RTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELI-HQPIDFIGINYYTSSMNRYNP-------GEAGGMLSSEAISMGAPKTDIG-WEIYAEGLYDLLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNFEWAEG-YGMRFGLVHVDYDT-L----VRTPKDSFYWYKGVISRGWLDL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -229647 for 3705 contacts (-62.0/contact) +
2D Compatibility (PS) -43803 + (NN) -9095 + (LL) 2208
1D Compatibility (HY) -27600 + (ID) 6750
Total energy: -314687.0 ( -84.94 by residue)
QMean score : 0.533
|
|
|