Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDT---------------AAL-------ETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPP-YTMPLFGLTIGHPVANKE---KAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3OF4 Chain:A ((2-207))
-MYLEKLQQWRYATADFSGAHITDDVLDKLLNTTRLTASSYGLQPYCTLVIRNKGLREQLVNHSFGQQKVADSSALVIFAAKTGAVADIVDPYISELSQQRQLTNEEAENTRNYFTQKLQAMSAATRKEWAVRQAYIGLGTFLLAAAELEVDSCPMEGI--EHDAYDNILSLKDLGLSTVFACPVGYRSEADTTQFQKKVRQPLSRFKV---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128038 for 1318 contacts (-97.1/contact) +
2D Compatibility (PS) -20064 + (NN) -14301 + (LL) 4220
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -165133.0 ( -125.29 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_3OF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OF4-query.scw
PDB file :
Tito_Scwrl_3OF4.pdb
: