Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGF-FAKEELADFSAFGSRIIGHPN-NKVAGIEMNTGSLGHGLSVSVGMALAAKM----------DGKSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVI-EADGNNPDKL-QAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
| 2R8P Chain:B ((2-250)) | -SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFT-DDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFG------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87341 for 2048 contacts (-42.6/contact) +
2D Compatibility (PS) -25801 + (NN) -13292 + (LL) 3956
1D Compatibility (HY) -11200 + (ID) 4400
Total energy: -138078.0 ( -67.42 by residue)
QMean score : 0.442
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