Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKKMMVMGSVGCGKTTLCQKLHGYDIL-YKKTQAVE--------YFQEMIDTPGEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTFS--PMFAS------IFAKPVIGIVTKVDLAESDKDIERAERELR----MAGAKHIFYISSVEETGIEELRAYLED
1MOZ Chain:A ((19-175))
-LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLG--------IRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGAL-SASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLI-
General information:
TITO was launched using:
RESULT:
Template:
1MOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63262 for 969 contacts (-65.3/contact) +
2D Compatibility (PS) -14046 + (NN) 439 + (LL) 804
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -82065.0 ( -84.69 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_1MOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MOZ-query.scw
PDB file :
Tito_Scwrl_1MOZ.pdb
: