Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENN---------------VPLFGAFE--------F-----ADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLD-----LQNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGV------PVEEAEQNKRAQKD------------------------------SSEHFSVMRPVVEKMAEITRVHLEKS------PS--EPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGSENL |
1JCE Chain:A ((4-327)) | -------------------------------KDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5665 for 1810 contacts (3.1/contact) +
2D Compatibility (PS) -23789 + (NN) 4177 + (LL) 2980
1D Compatibility (HY) 5600 + (ID) 1100
Total energy: -6467.0 ( -3.57 by residue)
QMean score : 0.048
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