Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK
2DWU Chain:C ((10-256))
----IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLEDTAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGIL-ADNLNPKHRFFTTGSVSSFEHIAERWL--------------
General information:
TITO was launched using:
RESULT:
Template:
2DWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203601 for 2218 contacts (-91.8/contact) +
2D Compatibility (PS) -26208 + (NN) -7899 + (LL) 1292
1D Compatibility (HY) -26400 + (ID) 6400
Total energy: -269216.0 ( -121.38 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2DWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DWU-query.scw
PDB file :
Tito_Scwrl_2DWU.pdb
: