Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSKQNVPSYGGQAVVEGVMFGGRK------QTVTAIRRIDGSLEYFYLEKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIG-------ILSFVFAKFVMTLIPVFLAELFRPIVPGD---TAQVFLESLFKLILLLT------YIFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVI---VGMFIYLLVPTDPL-WLRVVDRILL-------------IPVVLGVAFEVLQLTNKCRN----IPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE------ |
3NOY Chain:A ((10-358)) | MIQKRKTR---QIRVGNVKIGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVA-VPHKEDVEALEEIVKK-SPMPVIADIHFAPSYAFLSMEKGVH------GIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAERT------DVPLHIGITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTDDPVVEVETAYEILKSLGLRRRGVEIVACPTCGRIEVDLPKVVKEVQEKLSGVKTPLKVAVMGCVVNAIGEAREAD----IGLACGRGFAWLFKHGKPIKKVDESEMVDELLKEIQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204357 for 2366 contacts (-86.4/contact) +
2D Compatibility (PS) -31252 + (NN) -3243 + (LL) 920
1D Compatibility (HY) -4800 + (ID) 2350
Total energy: -245082.0 ( -103.58 by residue)
QMean score : 0.248
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