Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LQDLTLFLEQYKKVIDESLFKEINERNIEP-RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIA-LINQISFSSGAEGMVGGQLADLEAEN-KQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKR---ALNEHVTIAKSALSGHDFDDEILLKLADLIALREN |
3KRP Chain:D ((27-295)) | ----------------------------EPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGK-----------TYPKLIGVEKSKEFADRLNREAQ--EQLLHFHPHRAAPLIALANYIAYRDN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87861 for 2085 contacts (-42.1/contact) +
2D Compatibility (PS) -27470 + (NN) -16673 + (LL) 3468
1D Compatibility (HY) -20800 + (ID) 5550
Total energy: -154886.0 ( -74.29 by residue)
QMean score : 0.391
|
|
|