Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKGHRHIIIRELITSNEIDTQEDLVELLLERDVKVTQATVSRDIKELHLVKVPTQTGGYKYSLPADNSFNPHQKLKRALIDCFIGIDNVQFMIILKVMPGNGNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML
2P5M Chain:A ((7-83))
------------------------------------------------------------------------LSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
General information:
TITO was launched using:
RESULT:
Template:
2P5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68859 for 566 contacts (-121.7/contact) +
2D Compatibility (PS) -8459 + (NN) -3734 + (LL) 4996
1D Compatibility (HY) -9600 + (ID) 2150
Total energy: -87806.0 ( -155.13 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2P5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5M-query.scw
PDB file :
Tito_Scwrl_2P5M.pdb
: