Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEER-NWGGTCVLRGCDPKKVLIGAREARNLST-RLRGKGIKQ-AATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSHSLQVG-----DDLIYAEKIVIATGATPSTLKVEGKE------YIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKLHIKG---K--DSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKG-IVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKITYPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| 3URH Chain:A ((26-480)) | -----YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAG--IPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ-TSIAGVYAIGDVV--RGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3URH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -255591 for 3852 contacts (-66.4/contact) +
2D Compatibility (PS) -46304 + (NN) -7443 + (LL) 992
1D Compatibility (HY) -26400 + (ID) 6350
Total energy: -341096.0 ( -88.55 by residue)
QMean score : 0.449
|
|
|