Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGK---KMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIV-VHAPYI-INIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVG------EGADKGIKQIIQGLNEALIH--DQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKA-----------------SKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 3VNI Chain:A ((2-290)) | -MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLP-----FYSDIQINELKACAHGNGI-TLTVGHGPSAEQNLSS-PDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVD-HNNVKVMLDTFHMNIEEDSI----GGAIRTAG-----SYLGHLHTGECNR---------KVPGRGRIPWVEIGEALADIGYNG-SVVMEPFVRMGGTVGSNIKVWRDISNGADEKMLDREAQAALDFSRYVLEC---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99377 for 2183 contacts (-45.5/contact) +
2D Compatibility (PS) -28135 + (NN) -13699 + (LL) 2144
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -144817.0 ( -66.34 by residue)
QMean score : 0.484
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