Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKG-I--------VLREPSVVAMKKDTQEIVAVGSDAKNMIGRTPGNIVAIRPM---------KDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVGEPTGSMVVDIGGGTTEVAVISLGGIVT-----SRSVRTAGDDLDEVIINYIRKKYNLLI-------------GDRTAEAIKMEIGSASPKGLDLSPFSIRGR--DLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRKKMN |
| 2V7Y Chain:A ((2-351)) | -----SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKN---GERLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ-----TQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTP---ADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119919 for 2588 contacts (-46.3/contact) +
2D Compatibility (PS) -33716 + (NN) -12501 + (LL) 1076
1D Compatibility (HY) -9200 + (ID) 4300
Total energy: -178560.0 ( -69.00 by residue)
QMean score : 0.460
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