Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFSAQAETLATFYPHLKDLAVSPLEKINPTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFRE--KKETTFIANPGCYATATLLGLAPLATNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 1XYG Chain:A ((17-359)) | IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGTTQEIIKELP-TALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTRHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQPLFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187071 for 2980 contacts (-62.8/contact) +
2D Compatibility (PS) -36643 + (NN) -16215 + (LL) -216
1D Compatibility (HY) -29600 + (ID) 6050
Total energy: -275795.0 ( -92.55 by residue)
QMean score : 0.432
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