Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFSMEKGL-DYVMESFSDCLLQKEP----FALKESATWSDD--EWYLDQENRNFIPNE----GLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQK-IPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH |
| 4IIY Chain:B ((35-354)) | LLAAPLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEK--WSDESINW---NENKILRPKKLYKNNCAFYGSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSI-ATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAID------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186265 for 2636 contacts (-70.7/contact) +
2D Compatibility (PS) -32138 + (NN) -6704 + (LL) 1256
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -250651.0 ( -95.09 by residue)
QMean score : 0.481
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