Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNR----ANVHYI-EWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENTY-ADNFLGKTVYEWEKTASAA-SDLGIRVVYARFGLVLGTNG--GSFPVFEKLFQT-YT-GGRFGNGRQWYSWIHVDDVVAAILFIFDHE----QINGVVNFTAPHPVQEKKFAERLGKKMHKPYK-TPVPKKIIKFILGERAMTILDSQRAYPEKLM-SNHFEFRFETLQEALDDLLD |
| 3KO8 Chain:A ((1-303)) | MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDY--SWGAGIKGDVVFHFAANPEV--RLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADV-IPTPEEE-PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV--------------GDVKYMTLAVTKLMKLTGWRPTM-TSAEAVKKTA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180533 for 2406 contacts (-75.0/contact) +
2D Compatibility (PS) -29154 + (NN) -10146 + (LL) 1336
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -232047.0 ( -96.45 by residue)
QMean score : 0.458
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