Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKSIGLDDQAAIELLIKRSRNHE
4U0W Chain:B ((4-101))
MNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKP-------KMEQALQGLTSFTEDMKSRGM-----------------
General information:
TITO was launched using:
RESULT:
Template:
4U0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26259 for 592 contacts (-44.4/contact) +
2D Compatibility (PS) -10612 + (NN) -4390 + (LL) 2160
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -45651.0 ( -77.11 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_4U0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0W-query.scw
PDB file :
Tito_Scwrl_4U0W.pdb
: