Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKV----GGFPIALPIDDPS--------------VAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVE----TKA--------LQHLQ---RVDEQLG-SHTIDIEPTSELAKHHPNKKLVNSLH--HQFIK-----KL-APSFKVTARTADG-MIEAVEGDNLPSW-YLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
| 2V4U Chain:A ((298-552)) | -ICSIALVGKYTKLR----------DCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIRGT------------------LGKLQAISWARTKKIPFLGV-LGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELA--NHPYFVGVQFHPEFSSRP-MKPSPPYLGLLLAATGNLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71821 for 1671 contacts (-43.0/contact) +
2D Compatibility (PS) -22102 + (NN) -10635 + (LL) 1904
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -111004.0 ( -66.43 by residue)
QMean score : 0.352
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