Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSITEIITEGPIELLTKSENAQPALVSTSVAILRALET-YGVKADYVAGHSLGEYSALVAGGFLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLANLNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAEVKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIGSGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE |
2CUY Chain:A ((2-300)) | ---YAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLL-KLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGL----EGVEIANLNAPEQTVISGRRQAVEEAAERLKERRA-RVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKAL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183085 for 2783 contacts (-65.8/contact) +
2D Compatibility (PS) -33132 + (NN) -15503 + (LL) 856
1D Compatibility (HY) -20400 + (ID) 6500
Total energy: -257764.0 ( -92.62 by residue)
QMean score : 0.629
|
|
|