Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSITEIITEGPIELLTKSENAQPALVSTSVAILRALET-YGVKADYVAGHSLGEYSALVAGGFLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLANLNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAEVKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIGSGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE
2CUY Chain:A ((2-300))---YAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLL-KLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGL----EGVEIANLNAPEQTVISGRRQAVEEAAERLKERRA-RVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKAL------


General information:
TITO was launched using:
RESULT:

Template: 2CUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183085 for 2783 contacts (-65.8/contact) +
2D Compatibility (PS) -33132 + (NN) -15503 + (LL) 856
1D Compatibility (HY) -20400 + (ID) 6500
Total energy: -257764.0 ( -92.62 by residue)
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_2CUY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CUY-query.scw
PDB file : Tito_Scwrl_2CUY.pdb: