Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEFVPPLSFQVLSKNDVYTDTFDEKKSSVVAHIDLADWADLVIVAPATANVIGKMANGIADDMVTTTILATEAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVGRGRLEEPEKIVLRIAEFFQEDKNLLQGKNVLVTAGATREKLDPVRYFTNHSTGKMGFSIAESAARHGANVTLITTSKALPVP--HGVEAIYVESAEEMHQAVNERKVSQDIFVMTAAVADYTPAQV--------------------SDQKIKKQPGDFTIAMKRTKDILLEIGQHKTSEQVVIGFAAETE----NVEANARKKLTSKNADMIVANNISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKEAANFLRK
2GK4 Chain:A ((3-231))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQASSNLKEFLSKQNHQAKISSTDEVQVLFLKKTPKIISLVKEW-NPTIHLIGFKLLVDVTEDHLVDIARKSLIKNQADLIIANDLT----QISADQHRAIFVEKNQL---QTVQTKEEIAELLLEKIQAYH--


General information:
TITO was launched using:
RESULT:

Template: 2GK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88604 for 1571 contacts (-56.4/contact) +
2D Compatibility (PS) -22132 + (NN) -7840 + (LL) 15784
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -117742.0 ( -74.95 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_2GK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GK4-query.scw
PDB file : Tito_Scwrl_2GK4.pdb: