Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQIWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--EDEYGVVVANPPYGERLEDE---------------EAVRQLYREMGIVYKRMPTWSVYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED |
| 1NV8 Chain:A ((103-252)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFS---------------------------------------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD--TSGKIVLMEIGED--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71432 for 1001 contacts (-71.4/contact) +
2D Compatibility (PS) -14997 + (NN) -11822 + (LL) 18092
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -84759.0 ( -84.67 by residue)
QMean score : 0.387
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