Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASEKSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE
1ZMA Chain:A ((8-117))
-----------------------------------LDNIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPS--QLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG--------
General information:
TITO was launched using:
RESULT:
Template:
1ZMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45396 for 832 contacts (-54.6/contact) +
2D Compatibility (PS) -12226 + (NN) -7665 + (LL) 3964
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -68673.0 ( -82.54 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_1ZMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZMA-query.scw
PDB file :
Tito_Scwrl_1ZMA.pdb
: