Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDVFLKALPVLQKLTTA----GFEAYFVGGSVRDYLLNRTISDVDIATSAFPEEVKEIFQSTY----DTGIAHGTVTVRE-NNEFYEVTTFRTEGTYEDFRRPSEVKFIRSLEEDLQRRDFTMNAIAMDEH----FALHDPFSGQEAIKNKAIKAVGKASERFHEDALRMMRGVRFLSQLDFQLDSETEKALESQI--GLLQHTSVERITVEWLKMIKGPAIRRAMDLLLKVEMETYL-PGLKGEKKALTEFGSW----DW-GKRTTDDAIWLGLVVTVQPNN----VNAFLKAWKLPNKTIQLVSKAYQYALKM----KETWLAEELYH----AGKAVFSLVNELNIIRGKENNQHKLSQAYEALPIHSKKD-LAITGADLLKWSGESAGPWVKETLDKLECGVLCNEINNEKNQIKRWLGYHEE |
| 3H38 Chain:A ((15-424)) | ---VDPKILNLFRLLGKFGDEVNMPVYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLPGKLVKHDKFMTASLFLKGGLRIDIATARLEYYESPAKLPD-VE-MSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKEGVIRVLHT--LSFVDDPTRILRAIRFEQRFDFRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFPKTYYTPSMDEKMENLFRNIPWVEENFGEVDRFYAVLHVFLEFYDDESWKEVRDRYSLRRNLINEIRHVEKSAPALLEMLSERVPASFVYPLVKGVSNETICHFLAYL--SG--EKEGLFKSYLLK---IKNTKLEKINGEYLIR-KGITSGKIIGEVLEKILMKKLDGDTRDEEEIL-EEVLASL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117948 for 2806 contacts (-42.0/contact) +
2D Compatibility (PS) -40056 + (NN) -16984 + (LL) 1544
1D Compatibility (HY) -20000 + (ID) 3850
Total energy: -197294.0 ( -70.31 by residue)
QMean score : 0.441
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