Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISAGIANYDGRNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
3IGN Chain:A ((5-170)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKLSMTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRN-NIRQSDSAGRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVSMGIAQLTE-TPENYMQWMQKADEALYKAKESGRNKVVVSL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116529 for 1318 contacts (-88.4/contact) +
2D Compatibility (PS) -18505 + (NN) -13652 + (LL) 19888
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -139748.0 ( -106.03 by residue)
QMean score : 0.616
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