Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNV----ETEIYPDGWASSLRKEVTNFYQ------LEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAID-EKTTIVWICNPNNPTGNYIDLADIQAFLDKVPSDILVVLDEAYIEYVTPQPKKHEKLIR-TYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYP-ANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEENSAVIALLEKLL |
| 3CQ5 Chain:A ((28-365)) | --------------------------QLNVDIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVA--PGIVIVDEAYAEFSPSPSA--TTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVVPSESNFVFFGDFS-DQHAAWQAFLDRGVLIRDVGI---AGHLRTTIGVPEENDAFLDAAAEII |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145833 for 2790 contacts (-52.3/contact) +
2D Compatibility (PS) -35852 + (NN) -19382 + (LL) 2324
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -217693.0 ( -78.03 by residue)
QMean score : 0.537
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