Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMED--PFLKKRISQITEETPAEE-IAVLVEEVKKTGA-----KQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3WJN Chain:B ((52-335)) | --------------------------------------YIVSGGGKRIRPMIAVLAAR-AVGYEGNAHVTIAALIEFIHTATLLHDDVVDES------------FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYN-------KNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEA----DKAIAALQVLPDTPWREALIGLAHIAVQR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134705 for 2065 contacts (-65.2/contact) +
2D Compatibility (PS) -27684 + (NN) -15287 + (LL) 4580
1D Compatibility (HY) -13200 + (ID) 4300
Total energy: -190596.0 ( -92.30 by residue)
QMean score : 0.477
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