Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MVEMNFKVD--------------AFEGPLDLLLHLIGQLEVDIY-DIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDT-LEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKP--PMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVT-FLALLELMKRKLVE-VEQAESFA-D----LYVQGKGEEIS---- |
3QQZ Chain:A ((9-251)) | SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ-------------DHTFWFFKEKNPIEVYKVNGLLSSNELHISKD------KALQRQFTLDDVSGAEFNQQK------------NTLLVLSHESR--ALQEVTLVGEVIGEMSL---TKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24936 for 1627 contacts (-15.3/contact) +
2D Compatibility (PS) -21318 + (NN) 11069 + (LL) 3620
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -40815.0 ( -25.09 by residue)
QMean score : 0.147
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