Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDQERADLTMAMVGSGDTIDLSEIEGIKVDKHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPADKKMYALRDVTGTVNSI-PLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLAHAMVRIGNNVGRNTMAVISDMSQPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLGSQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDASIVDHPEKLPQAKYQIEVPAKTSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGESLVTIFADQE-DVENVKAKIYENIQISDH-AIAPTLVHKVITE |
| 1BRW Chain:A ((1-432)) | MRMVDLIAKKRDGKALTKEEIEWIVRGYTNGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEMLDLSSIRGVKVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNENGIAIIGQTGDLTPADKKLYALRDV-TATVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEARRLARVMVDIGKRVGRRTMAVISDMSQPLGYAVGNALEVKEAIETLKGNGPHDLTELCLTLGSHMVYLAEKAPSLDEARRLLEEAIRSGAAIAAFKTFLAAQGGDASVVDDLDKLPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGDRVQKGEALATIHSNRPDVLDV-KEKIEAAIRLSPQPVARPPLIYETI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176417 for 3904 contacts (-45.2/contact) +
2D Compatibility (PS) -46773 + (NN) -22717 + (LL) 400
1D Compatibility (HY) -46000 + (ID) 14250
Total energy: -305757.0 ( -78.32 by residue)
QMean score : 0.539
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