Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
3STJ Chain:A ((263-330)) | --------------------------------------------------------------------------------------------------------------------------------RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGK-PL-EVEVT----------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27304 for 408 contacts (-66.9/contact) +
2D Compatibility (PS) -7118 + (NN) -1136 + (LL) 16892
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -22766.0 ( -55.80 by residue)
QMean score : 0.768
|
|
|