Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVYELNADLKPVNKYYLDK
1XQ9 Chain:B ((14-238))
--LVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEEQVKIWRRSYDIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYYL--
General information:
TITO was launched using:
RESULT:
Template:
1XQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95143 for 1835 contacts (-51.8/contact) +
2D Compatibility (PS) -24193 + (NN) -5142 + (LL) 260
1D Compatibility (HY) -22000 + (ID) 6400
Total energy: -152618.0 ( -83.17 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ9-query.scw
PDB file :
Tito_Scwrl_1XQ9.pdb
: