Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN
2RQL Chain:A ((1-95))
-MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEK---VTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36688 for 655 contacts (-56.0/contact) +
2D Compatibility (PS) -10077 + (NN) 305 + (LL) 4400
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -51660.0 ( -78.87 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2RQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RQL-query.scw
PDB file :
Tito_Scwrl_2RQL.pdb
: