Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQIIDDVNGVTLASASNLDKDFGS-AESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYHGRVKALAEAARENGLEF
1OVY Chain:A ((24-120))
-----------------------GTTERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLDSTNNIEAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGRVKALADAAREAGLEF
General information:
TITO was launched using:
RESULT:
Template:
1OVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3521 for 844 contacts (-4.2/contact) +
2D Compatibility (PS) -10733 + (NN) -6936 + (LL) 2000
1D Compatibility (HY) -8800 + (ID) 3500
Total energy: -31490.0 ( -37.31 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1OVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OVY-query.scw
PDB file :
Tito_Scwrl_1OVY.pdb
: