Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGILGRKVGMTQVFTENG----------ELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKR------AILSNKPEQ-------GHV---------AK----ANTTP---------KRFIREFRDVNLD----------EYEIGAEVKV-DVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGS-RYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQNLEIVKVDV----------------EKNVLLVKGNVPGAKKALVQIKTATKAK |
| 1VQ8 Chain:B ((39-318)) | -VQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6352 for 1301 contacts (-4.9/contact) +
2D Compatibility (PS) -21795 + (NN) -2956 + (LL) 272
1D Compatibility (HY) -2800 + (ID) 3350
Total energy: -36981.0 ( -28.43 by residue)
QMean score : 0.357
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