Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVESYHENGAYF-VIAPQIAIPHARPTDGVENSAVSLVVLKDGVNFGHAAN----DPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
3T43 Chain:A ((3-132))
----------------SQNDIIKALASPLINDGMVVSDFADHVITREQNAPTGLPVEPVGVAIPHTDSK-YVRQNAISVGILAEPVNFEDAGGEPDPVPVRVVFMLALGNWFDITNVLWWIMDVIQDADFMQQLLVMNDD-EIYQSIY-
General information:
TITO was launched using:
RESULT:
Template:
3T43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102766 for 914 contacts (-112.4/contact) +
2D Compatibility (PS) -13529 + (NN) -5152 + (LL) 968
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -131979.0 ( -144.40 by residue)
QMean score : 0.719
(partial model without unconserved sides chains):
PDB file :
Tito_3T43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T43-query.scw
PDB file :
Tito_Scwrl_3T43.pdb
: