Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHT-FAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3E6C Chain:C ((26-222))
-----------------------RNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFE------DGSEKLLYYAGGNSLIGKLYPTG---NNI-YATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLASLKRENILDKKKNKIIVYNLGEL
General information:
TITO was launched using:
RESULT:
Template:
3E6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85996 for 1321 contacts (-65.1/contact) +
2D Compatibility (PS) -21535 + (NN) -12260 + (LL) 3632
1D Compatibility (HY) -9200 + (ID) 1250
Total energy: -126609.0 ( -95.84 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_3E6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6C-query.scw
PDB file :
Tito_Scwrl_3E6C.pdb
: