Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VILIIDHNDSFTYNLYQYFLELQEEVQVVSATSFSLEAFQQLAPEMVVLSPGPGSPEDF---PVSLALLGK--I-QVPILGICLGHQIIGHFFGAKVVPANVPVHGKTSVISH-----------------------------TGEGLFADLEP-AFQVTRYHSLVIDPTTVPVNLKVTAVTEDGVIMGLVHATKPIHSVQFHPEAILSENGHAILKNFVR-LGRNVK
3UOW Chain:A ((9-259))
KILVLNFGSQYFHLIVKRLNNIKIFSETKDYGV-ELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTD-VNILRNDNINNITYCRNFSSAMDLYSNYKLMN--CCLFENIKSDITTVWMNHNDEVT--KIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICK---
General information:
TITO was launched using:
RESULT:
Template:
3UOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152897 for 1529 contacts (-100.0/contact) +
2D Compatibility (PS) -19421 + (NN) -9570 + (LL) 292
1D Compatibility (HY) -10000 + (ID) 1900
Total energy: -193496.0 ( -126.55 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3UOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UOW-query.scw
PDB file :
Tito_Scwrl_3UOW.pdb
: