Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAVGIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLKEVREICETGVEIVAMDATTRKRPHNEDLKDILSAIRKEFPNTLFMADTASIEDVYYADSLGFDLIGTTLYGYTEETANKNISDDDFSHL-KEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQEITTRFTNEIQKIQEERGK
3Q58 Chain:A ((16-228))
--------ENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPV--DIDSLLTRIRLH--GLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGP--ITP-VEPDLAMVTQ--LSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVK--------
General information:
TITO was launched using:
RESULT:
Template:
3Q58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125675 for 1810 contacts (-69.4/contact) +
2D Compatibility (PS) -23035 + (NN) -13322 + (LL) 1780
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -179702.0 ( -99.28 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3Q58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q58-query.scw
PDB file :
Tito_Scwrl_3Q58.pdb
: