Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
2FBI Chain:A ((5-139))
----RPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIK-
General information:
TITO was launched using:
RESULT:
Template:
2FBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42080 for 844 contacts (-49.9/contact) +
2D Compatibility (PS) -14285 + (NN) -5490 + (LL) 332
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -69023.0 ( -81.78 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2FBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBI-query.scw
PDB file :
Tito_Scwrl_2FBI.pdb
: