Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQ-EFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK
4ERX Chain:A ((4-193))
-VQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEML-AGDWTRAMQKLHSQK
General information:
TITO was launched using:
RESULT:
Template:
4ERX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107329 for 1567 contacts (-68.5/contact) +
2D Compatibility (PS) -20028 + (NN) -7141 + (LL) 328
1D Compatibility (HY) -10800 + (ID) 3250
Total energy: -148220.0 ( -94.59 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4ERX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ERX-query.scw
PDB file :
Tito_Scwrl_4ERX.pdb
: