Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYST---------YKNGIEIE-VDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDAHTRTSLNLSEKLGYEFSHEYIAYEID
3MGD Chain:A ((52-148))-----------------------------------------------------------------------------------------------------------------------------------------------------------------VEWIAEENNQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLELNLL


General information:
TITO was launched using:
RESULT:

Template: 3MGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35696 for 537 contacts (-66.5/contact) +
2D Compatibility (PS) -9066 + (NN) -2856 + (LL) 11148
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -39270.0 ( -73.13 by residue)
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_3MGD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MGD-query.scw
PDB file : Tito_Scwrl_3MGD.pdb: